IC50 Contents Determining the IC50 of a drug See also References External links Navigation menuIC50 versus NIH Chemical Genomics Center // Assay Guidance // Assay Guidance Manual // Assay Operations for SAR SupportGlaxo Wellcome and Science - Global10.1016/0006-2952(73)90196-24202581"Estimation of competitive antagonist affinity from functional inhibition curves using the Gaddum, Schild and Cheng-Prusoff equations"10.1111/j.1476-5381.1993.tb13737.x21757648401922"Standard units for expressing drug concentrations in biological fluids"10.1111/j.1365-2125.1983.tb02136.x142796010.1007/bf022474388739548ELISA IC50/EC50 Online ToolIC50 to pIC50 calculatorOnline tool for analysis of in vitro resistance to antimalarial drugsIC50-to-Ki converter

Pharmacodynamics


potencyinhibitorenzymecellcell receptormicroorganismmolar concentrationantagonist drugpotencyFDAEC50agonist drugsdose-response curveATPcompetitiveKdinhibition constantWilliam Prusoffaffinitymolar concentrationtwo bottle fluid consumption test






Visual demonstration of how to derive IC50 value: Arrange data with inhibition on vertical axis and log(concentration) on horizontal axis; then identify max and min inhibition; then the IC50 is the concentration at which the curve passes through the 50% inhibition level.


The half maximal inhibitory concentration (IC50) is a measure of the potency of a substance in inhibiting a specific biological or biochemical function.


This quantitative measure indicates how much of a particular drug or other substance (inhibitor) is needed to inhibit a given biological process (or component of a process, i.e. an enzyme, cell, cell receptor or microorganism) by half. The values are typically expressed as molar concentration.


It is commonly used as a measure of antagonist drug potency in pharmacological research. According to the FDA, IC50 represents the concentration of a drug that is required for 50% inhibition in vitro.[1] It is comparable to an EC50 for agonist drugs. EC50 also represents the plasma concentration required for obtaining 50% of a maximum effect in vivo.[1]




Contents





  • 1 Determining the IC50 of a drug

    • 1.1 Functional antagonist assay


    • 1.2 Competition binding assays

      • 1.2.1 IC50 and affinity



    • 1.3 pIC50


    • 1.4 Behavioral Assays



  • 2 See also


  • 3 References


  • 4 External links




Determining the IC50 of a drug



Functional antagonist assay


The IC50 of a drug can be determined by constructing a dose-response curve and examining the effect of different concentrations of antagonist on reversing agonist activity. IC50 values can be calculated for a given antagonist by determining the concentration needed to inhibit half of the maximum biological response of the agonist.[2] IC50 values can be used to compare the potency of two antagonists.


IC50 values are very dependent on conditions under which they are measured. In general, the higher the concentration of inhibitor, the more agonist activity will be lowered. IC50 value increases as agonist concentration increases. Furthermore, depending on the type of inhibition other factors may influence IC50 value; for ATP dependent enzymes IC50 value has an interdependency with concentration of ATP, especially so if inhibition is all of it competitive.



Competition binding assays


In this type of assay, a single concentration of radioligand (usually an agonist) is used in every assay tube. The ligand is used at a low concentration, usually at or below its Kd value. The level of specific binding of the radioligand is then determined in the presence of a range of concentrations of other competing non-radioactive compounds (usually antagonists), in order to measure the potency with which they compete for the binding of the radioligand. Competition curves may also be computer-fitted to a logistic function as described under direct fit.


In this situation the IC50 is the concentration of competing ligand which displaces 50% of the specific binding of the radioligand. The IC50 value is converted to an absolute inhibition constant Ki using the Cheng-Prusoff equation formulated by Yung-Chi Cheng and William Prusoff (see Ki).[2][3]



IC50 and affinity


IC50 is not a direct indicator of affinity although the two can be related at least for competitive agonists and antagonists by the Cheng-Prusoff equation.[4] For enzymatic reactions, this equation is:


Ki=IC501+[S]Kmdisplaystyle K_i=frac ce IC501+frac [S]K_m

where Ki is the binding affinity of the inhibitor, IC50 is the functional strength of the inhibitor, [S] is fixed substrate concentration and Km is the concentration of substrate at which enzyme activity is at half maximal (but is frequently confused with substrate affinity for the enzyme, which it is not).


Alternatively, for inhibition constants at cellular receptors:[5]


Ki=IC50[A]EC50+1displaystyle K_i=frac ce IC50frac [A]ce EC50+1

where [A] is the fixed concentration of agonist and EC50 is the concentration of agonist that results in half maximal activation of the receptor. Whereas the IC50 value for a compound may vary between experiments depending on experimental conditions, (e.g. substrate and enzyme concentrations) the Ki is an absolute value. Ki is the inhibition constant for a drug; the concentration of competing ligand in a competition assay which would occupy 50% of the receptors if no ligand were present.[3]


The Cheng-Prusoff equation produces good estimates at high agonist concentrations, but over- or under-estimates Ki at low agonist concentrations. In these conditions, other analyses have been recommended.[5]



pIC50


Sometimes, IC50 values are converted to the pIC50 scale.


pIC50=−log10⁡(IC50)displaystyle ce pIC_50=-log _10ce (IC_50)

Note the minus sign, which means that higher values of pIC50 indicate exponentially greater potency.


pIC50 is usually given in terms of molar concentration (mol/L, or M). Therefore, to obtain a pIC50, an IC50 should be specified in units of M. When IC50 is expressed in μM or nM, it will need to be converted to M before conversion to pIC50.[6]



Behavioral Assays


The IC50 terminology is also used for some behavioral measures in vivo, such as a two bottle fluid consumption test. When animals decrease consumption from the drug-laced water bottle, the concentration of the drug that results in a 50% decrease in consumption is considered the IC50 for fluid consumption of that drug.[7]



See also


  • Certain safety factor


  • EC50 (half maximal effective concentration)


  • LD50 (median lethal dose)


  • Ki (equilibrium constant)


References




  1. ^ ab IC50 versus EC50


  2. ^ ab NIH Chemical Genomics Center // Assay Guidance // Assay Guidance Manual // Assay Operations for SAR Support


  3. ^ ab Glaxo Wellcome and Science - Global


  4. ^ Cheng Y, Prusoff WH (December 1973). "Relationship between the inhibition constant (KI) and the concentration of inhibitor which causes 50 per cent inhibition (I50) of an enzymatic reaction". Biochem Pharmacol. 22 (23): 3099–108. doi:10.1016/0006-2952(73)90196-2. PMID 4202581..mw-parser-output cite.citationfont-style:inherit.mw-parser-output .citation qquotes:"""""""'""'".mw-parser-output .citation .cs1-lock-free abackground:url("//upload.wikimedia.org/wikipedia/commons/thumb/6/65/Lock-green.svg/9px-Lock-green.svg.png")no-repeat;background-position:right .1em center.mw-parser-output .citation .cs1-lock-limited a,.mw-parser-output .citation .cs1-lock-registration abackground:url("//upload.wikimedia.org/wikipedia/commons/thumb/d/d6/Lock-gray-alt-2.svg/9px-Lock-gray-alt-2.svg.png")no-repeat;background-position:right .1em center.mw-parser-output .citation .cs1-lock-subscription abackground:url("//upload.wikimedia.org/wikipedia/commons/thumb/a/aa/Lock-red-alt-2.svg/9px-Lock-red-alt-2.svg.png")no-repeat;background-position:right .1em center.mw-parser-output .cs1-subscription,.mw-parser-output .cs1-registrationcolor:#555.mw-parser-output .cs1-subscription span,.mw-parser-output .cs1-registration spanborder-bottom:1px dotted;cursor:help.mw-parser-output .cs1-ws-icon abackground:url("//upload.wikimedia.org/wikipedia/commons/thumb/4/4c/Wikisource-logo.svg/12px-Wikisource-logo.svg.png")no-repeat;background-position:right .1em center.mw-parser-output code.cs1-codecolor:inherit;background:inherit;border:inherit;padding:inherit.mw-parser-output .cs1-hidden-errordisplay:none;font-size:100%.mw-parser-output .cs1-visible-errorfont-size:100%.mw-parser-output .cs1-maintdisplay:none;color:#33aa33;margin-left:0.3em.mw-parser-output .cs1-subscription,.mw-parser-output .cs1-registration,.mw-parser-output .cs1-formatfont-size:95%.mw-parser-output .cs1-kern-left,.mw-parser-output .cs1-kern-wl-leftpadding-left:0.2em.mw-parser-output .cs1-kern-right,.mw-parser-output .cs1-kern-wl-rightpadding-right:0.2em


  5. ^ ab Lazareno, S.; Birdsall, N. J. (1993). "Estimation of competitive antagonist affinity from functional inhibition curves using the Gaddum, Schild and Cheng-Prusoff equations". British Journal of Pharmacology. 109 (4): 1110–1119. doi:10.1111/j.1476-5381.1993.tb13737.x. PMC 2175764. PMID 8401922.


  6. ^ Stewart MJ, Watson ID (1983). "Standard units for expressing drug concentrations in biological fluids". British Journal of Clinical Pharmacology. 16 (1): 3–7. doi:10.1111/j.1365-2125.1983.tb02136.x. PMC 1427960.


  7. ^ Robinson, SF; Marks, MJ; Collins, AC (1996). "Inbred mouse strains vary in oral self-selection of nicotine". Psychopharmacology. 124 (4): 332–9. doi:10.1007/bf02247438. PMID 8739548.



External links


  • ELISA IC50/EC50 Online Tool

  • IC50 to pIC50 calculator

  • Online tool for analysis of in vitro resistance to antimalarial drugs

  • IC50-to-Ki converter


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